Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_35605 | Not Available | Negative | 7669095 - 7670114 | 35923.5 |
| histidine kinase | APR52_35610 | Not Available | Positive | 7670407 - 7672527 | 78268.5 |
| two-component system response regulator | APR52_35615 | Not Available | Positive | 7672524 - 7673261 | 27227.7 |
| hypothetical protein | APR52_35620 | Not Available | Positive | 7673609 - 7687753 | 447055.0 |
| fasciclin | APR52_35625 | P74615 | Positive | 7688475 - 7689038 | 19021.3 |
| hypothetical protein | APR52_35630 | Not Available | Negative | 7689557 - 7689835 | 9865.91 |
| isochorismatase | APR52_35635 | P37532 | Negative | 7689953 - 7690576 | 22607.5 |
| hypothetical protein | APR52_35640 | O32050 | Positive | 7690799 - 7691284 | 18321.6 |
| 3-oxoacyl-acp reductase | APR52_35645 | Not Available | Positive | 7691387 - 7692151 | 26446.8 |
| hydroxyacid dehydrogenase | APR52_35650 | Q5SKC5 | Positive | 7692192 - 7692806 | 22869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
