Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_02865 | P55634 | Negative | 628134 - 629372 | 45558.1 |
| hypothetical protein | APR52_02870 | Not Available | Negative | 629880 - 630080 | 7429.31 |
| hypothetical protein | APR52_02875 | Q84BZ0 | Negative | 630526 - 631713 | 42039.7 |
| transcriptional regulator | APR52_02880 | P37335 | Negative | 631781 - 632479 | 26500.8 |
| 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase | APR52_02885 | Not Available | Positive | 632610 - 633461 | 31280.6 |
| ferredoxin | APR52_02890 | Not Available | Positive | 633472 - 633855 | 13268.1 |
| catechol 2,3-dioxygenase | APR52_02895 | P06622 | Positive | 633857 - 634801 | 34930.7 |
| cobalamin adenosyltransferase | APR52_02900 | Q8ZNR5 | Positive | 634816 - 635250 | 14398.1 |
| 2-hydroxymuconic semialdehyde dehydrogenase | APR52_02905 | Not Available | Positive | 635258 - 636712 | 51888.1 |
| 2-oxopent-4-enoate hydratase | APR52_02910 | Not Available | Positive | 636718 - 637500 | 27434.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
