Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-alanine antiporter | APR52_35450 | Not Available | Negative | 7639119 - 7640807 | 58806.7 |
| aspartate-alanine antiporter | APR52_35455 | Q5NLV5 | Negative | 7640834 - 7642504 | 57412.1 |
| sugar abc transporter | APR52_35460 | Q9F9B2 | Positive | 7642803 - 7643804 | 34053.3 |
| abc transporter permease | APR52_35465 | Q9F9B1 | Positive | 7643831 - 7644790 | 32747.0 |
| sugar abc transporter atp-binding protein | APR52_35470 | Q9F9B0 | Positive | 7644790 - 7645587 | 28621.3 |
| serine/threonine protein kinase | APR52_35475 | Not Available | Positive | 7645580 - 7646815 | 43747.6 |
| hypothetical protein | APR52_35480 | Q47319 | Positive | 7646854 - 7647597 | 27104.9 |
| abc transporter substrate-binding protein | APR52_35490 | Not Available | Negative | 7648418 - 7649452 | 36670.2 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR52_35495 | Not Available | Negative | 7649494 - 7650558 | 38366.5 |
| abc transporter permease | APR52_35500 | P0A625 | Negative | 7650555 - 7651358 | 28397.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
