Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_35400 | Not Available | Positive | 7627049 - 7628026 | 34986.5 |
| lysr family transcriptional regulator | APR52_35405 | Not Available | Negative | 7628027 - 7628971 | 34284.5 |
| hypothetical protein | APR52_35410 | Not Available | Positive | 7629073 - 7630464 | 48389.9 |
| beta-lactamase | APR52_35415 | Not Available | Positive | 7630461 - 7630826 | 13438.2 |
| abc transporter substrate-binding protein | APR52_35420 | P70791 | Positive | 7630884 - 7631849 | 33611.6 |
| hypothetical protein | APR52_35425 | B8NPA4 | Positive | 7631966 - 7633703 | 60428.3 |
| hypothetical protein | APR52_35430 | Not Available | Negative | 7633704 - 7633945 | 9046.72 |
| 2-alkenal reductase | APR52_35435 | P77319 | Negative | 7633962 - 7635680 | 62437.8 |
| hypothetical protein | APR52_35440 | Not Available | Negative | 7635846 - 7637084 | 42404.4 |
| aspartate 4-decarboxylase | APR52_35445 | Q53IZ1 | Negative | 7637396 - 7639063 | 62056.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
