Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_35345 | Not Available | Negative | 7618473 - 7619153 | 24978.4 |
| hypothetical protein | APR52_35350 | Not Available | Positive | 7619336 - 7620121 | 27772.3 |
| hypothetical protein | APR52_35355 | Not Available | Positive | 7620329 - 7621303 | 34197.6 |
| aldehyde-activating protein | APR52_35365 | Not Available | Negative | 7622130 - 7622546 | 15036.8 |
| polyketide cyclase | APR52_35370 | Not Available | Negative | 7622570 - 7623034 | 17110.4 |
| arsr family transcriptional regulator | APR52_35375 | C0H3Q8 | Negative | 7623037 - 7623351 | 12166.7 |
| hypothetical protein | APR52_35380 | O22553 | Negative | 7623443 - 7624588 | 42672.3 |
| nitroreductase | APR52_35385 | Not Available | Negative | 7624663 - 7625376 | 25530.4 |
| pnbb | APR52_35390 | Not Available | Negative | 7625380 - 7625922 | 19831.1 |
| hypothetical protein | APR52_35395 | Not Available | Negative | 7625949 - 7626935 | 34941.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
