Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase (acetylating) | APR52_35240 | B2UJF2 | Positive | 7600930 - 7601853 | 32168.1 |
| 4-hydroxy-2-oxovalerate aldolase | APR52_35245 | B1Y2E5 | Positive | 7601867 - 7602910 | 37101.1 |
| 4-oxalocrotonate decarboxylase | APR52_35250 | P49156 | Positive | 7602907 - 7603695 | 27695.5 |
| 4-oxalocrotonate tautomerase | APR52_35255 | Q9RHM8 | Positive | 7603715 - 7603906 | 7043.5 |
| 3-oxoadipate enol-lactonase | APR52_35265 | P00632 | Positive | 7604966 - 7605766 | 28702.5 |
| helicase snf2 | APR52_35270 | Not Available | Positive | 7606037 - 7606417 | 12343.3 |
| hypothetical protein | APR52_35275 | Not Available | Negative | 7606572 - 7606955 | 13872.3 |
| arac family transcriptional regulator | APR52_35280 | Q8AVY8 | Negative | 7607073 - 7607906 | 29196.0 |
| arac family transcriptional regulator | APR52_35285 | Not Available | Positive | 7608017 - 7608970 | 34732.8 |
| hypothetical protein | APR52_35290 | Not Available | Positive | 7609012 - 7609542 | 18700.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
