Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenol hydroxylase | APR52_35190 | P19730 | Positive | 7591745 - 7592740 | 37635.5 |
| monooxygenase | APR52_35195 | Not Available | Positive | 7592768 - 7593064 | 10737.7 |
| phenol 2-monooxygenase | APR52_35200 | P19732 | Positive | 7593121 - 7594716 | 61693.7 |
| phenol hydroxylase | APR52_35205 | P19733 | Positive | 7594756 - 7595118 | 12976.5 |
| phenol hydroxylase | APR52_35210 | P19734 | Positive | 7595147 - 7596205 | 38487.1 |
| hypothetical protein | APR52_35215 | Not Available | Negative | 7596511 - 7596804 | 9623.31 |
| catechol 2,3-dioxygenase | APR52_35220 | Q04285 | Positive | 7596872 - 7597804 | 35023.7 |
| 2-hydroxymuconic semialdehyde dehydrogenase | APR52_35225 | P19059 | Positive | 7597815 - 7599269 | 51524.7 |
| 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase | APR52_35230 | P19076 | Positive | 7599280 - 7600104 | 29900.9 |
| 2-oxopent-4-enoate hydratase | APR52_35235 | P23107 | Positive | 7600134 - 7600916 | 27262.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
