Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_35140 | Not Available | Negative | 7580990 - 7584073 | 113113.0 |
| hypothetical protein | APR52_35145 | Not Available | Negative | 7584301 - 7585065 | 28281.2 |
| hypothetical protein | APR52_35150 | Not Available | Positive | 7585223 - 7586332 | 39886.1 |
| hypothetical protein | APR52_35155 | Not Available | Positive | 7586365 - 7586742 | 13601.4 |
| pyridine nucleotide-disulfide oxidoreductase | APR52_35160 | P9WJJ1 | Negative | 7586765 - 7587976 | 42927.6 |
| hypothetical protein | APR52_35165 | Not Available | Positive | 7588138 - 7588362 | 8136.81 |
| cupin | APR52_35170 | Not Available | Positive | 7588417 - 7588833 | 14367.2 |
| transcriptional regulator | APR52_35175 | Not Available | Positive | 7588907 - 7589416 | 18337.2 |
| fis family transcriptional regulator | APR52_35180 | P06519 | Positive | 7589508 - 7591214 | 63345.1 |
| phenol hydroxylase | APR52_35185 | P19729 | Positive | 7591461 - 7591694 | 9046.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
