Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase | APR52_35090 | P20576 | Positive | 7573419 - 7574003 | 20876.0 |
| threonine aldolase | APR52_35095 | O07051 | Positive | 7574008 - 7575066 | 37239.6 |
| lysine transporter lyse | APR52_35100 | Not Available | Positive | 7575094 - 7575753 | 22964.7 |
| anthranilate phosphoribosyltransferase | APR52_35105 | Q123F3 | Positive | 7575775 - 7576797 | 35901.6 |
| indole-3-glycerol-phosphate synthase | APR52_35110 | C5CKE4 | Positive | 7576830 - 7577630 | 28556.5 |
| uracil-dna glycosylase | APR52_35115 | Q21SE9 | Positive | 7577627 - 7578334 | 25328.4 |
| Trna-tyr | Not Available | Not Available | Positive | 7578445 - 7578530 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 7578596 - 7578669 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 7578701 - 7578775 | Not Available |
| hypothetical protein | APR52_35135 | Not Available | Negative | 7579278 - 7580993 | 64484.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
