Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_02815 | Not Available | Positive | 617505 - 617732 | 8425.36 |
| cytochrome c | APR52_02820 | Not Available | Negative | 617750 - 618925 | 42106.0 |
| abc transporter | APR52_02825 | Q8XZQ4 | Negative | 618951 - 619757 | 29188.2 |
| sulfonate abc transporter permease | APR52_02830 | Not Available | Negative | 619751 - 620824 | 38200.3 |
| acyl-coa dehydrogenase | APR52_02835 | Not Available | Negative | 621036 - 622322 | 46707.1 |
| hypothetical protein | APR52_02840 | Not Available | Negative | 622397 - 622990 | 20950.2 |
| hypothetical protein | APR52_02845 | Not Available | Negative | 623139 - 623591 | 16303.8 |
| hypothetical protein | APR52_02850 | Not Available | Negative | 624593 - 625225 | 22931.5 |
| integrase | APR52_02855 | P55636 | Negative | 626210 - 627208 | 37397.6 |
| integrase | APR52_02860 | P55635 | Negative | 627205 - 628137 | 35198.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
