Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | APR52_35040 | Not Available | Positive | 7562220 - 7563128 | 33613.0 |
| acetyl-coa carboxylase carboxyltransferase subunit | APR52_35045 | Not Available | Positive | 7563199 - 7564821 | 58173.1 |
| 3-methylcrotonyl-coa carboxylase | APR52_35050 | Q54KE6 | Positive | 7564839 - 7566812 | 70389.3 |
| enoyl-coa hydratase | APR52_35055 | Not Available | Positive | 7566809 - 7567585 | 27913.7 |
| hypothetical protein | APR52_35060 | Not Available | Negative | 7567602 - 7568495 | 33064.7 |
| ornithine cyclodeaminase | APR52_35065 | Not Available | Positive | 7568599 - 7569594 | 35230.0 |
| phosphoglycolate phosphatase | APR52_35070 | Q3SGR5 | Positive | 7569650 - 7570378 | 25960.0 |
| hypothetical protein | APR52_35075 | Not Available | Negative | 7570394 - 7570993 | 21225.2 |
| anthranilate synthase | APR52_35080 | Q9XAZ0 | Positive | 7571364 - 7572866 | 54817.1 |
| hypothetical protein | APR52_35085 | Not Available | Positive | 7572962 - 7573312 | 12866.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
