Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_34990 | Q9I749 | Negative | 7551459 - 7551977 | 18727.5 |
| type vi secretion protein impa | APR52_34995 | Q9I750 | Negative | 7552061 - 7553095 | 36059.8 |
| type vi secretion protein | APR52_35000 | Not Available | Positive | 7553167 - 7553709 | 19503.5 |
| hypothetical protein | APR52_35005 | Not Available | Negative | 7553739 - 7554935 | 42551.5 |
| type iv / vi secretion system, dotu | APR52_35010 | Not Available | Negative | 7554952 - 7556283 | 48356.9 |
| luxr family transcriptional regulator | APR52_35015 | A8R3T0 | Positive | 7556532 - 7557221 | 24240.8 |
| terpene utilization protein atua | APR52_35020 | Not Available | Negative | 7557263 - 7559074 | 63604.8 |
| acyl-coa dehydrogenase | APR52_35025 | Not Available | Positive | 7559229 - 7560404 | 42448.4 |
| hypothetical protein | APR52_35030 | P9WM90 | Positive | 7560429 - 7561262 | 30571.1 |
| hypothetical protein | APR52_35035 | Not Available | Positive | 7561259 - 7562152 | 32783.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
