Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR52_34775 | Q88FX7 | Positive | 7502924 - 7503580 | 25055.0 |
| laci family transcriptional regulator | APR52_34780 | Not Available | Positive | 7503799 - 7504782 | 33738.9 |
| abc transporter permease | APR52_34785 | Q9K9G6 | Positive | 7504865 - 7505638 | 28166.7 |
| nitrate abc transporter substrate-binding protein | APR52_34790 | A9WGD2 | Positive | 7505694 - 7506698 | 35816.4 |
| abc transporter atp-binding protein | APR52_34795 | Not Available | Positive | 7506745 - 7507524 | 28597.2 |
| hypothetical protein | APR52_34800 | Not Available | Positive | 7507535 - 7508965 | 51310.9 |
| oxidoreductase | APR52_34805 | Q8GAK6 | Positive | 7509007 - 7510182 | 44096.8 |
| hypothetical protein | APR52_34810 | Not Available | Positive | 7510202 - 7511407 | 43177.9 |
| endonuclease | APR52_34815 | Not Available | Positive | 7511416 - 7512294 | 32134.4 |
| cytoplasmic protein | APR52_34820 | P75843 | Positive | 7512345 - 7513439 | 41449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
