Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | APR52_34720 | C5CUU4 | Negative | 7492949 - 7493152 | 7505.59 |
| translation initiation factor if-3 | APR52_34725 | Q8XZ28 | Negative | 7493352 - 7493897 | 20012.4 |
| threonine--trna ligase | APR52_34730 | C5CUU2 | Negative | 7494071 - 7495978 | 72402.5 |
| isocitrate lyase | APR52_34735 | P51066 | Negative | 7496313 - 7497644 | 48723.3 |
| gamma-glutamyl cyclotransferase | APR52_34740 | Not Available | Negative | 7497908 - 7498318 | 14820.5 |
| hypothetical protein | APR52_34745 | Not Available | Positive | 7498355 - 7499302 | 33446.2 |
| dna topoisomerase iii | APR52_34755 | Not Available | Positive | 7499664 - 7499891 | 8160.12 |
| arac family transcriptional regulator | APR52_34760 | Not Available | Negative | 7499974 - 7500726 | 27122.5 |
| preprotein translocase subunit secd | APR52_34765 | Not Available | Positive | 7500857 - 7501150 | 10354.3 |
| thiamine pyrophosphate-binding protein | APR52_34770 | P00893 | Negative | 7501116 - 7502840 | 61619.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
