Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_34670 | P42107 | Positive | 7484983 - 7485705 | 26102.7 |
| hypothetical protein | APR52_34675 | Not Available | Negative | 7486418 - 7486654 | 9053.82 |
| hypothetical protein | APR52_34680 | Not Available | Positive | 7486863 - 7487285 | 15414.8 |
| hypothetical protein | APR52_34685 | Not Available | Positive | 7487372 - 7487755 | 13651.7 |
| Trna-pro | Not Available | Not Available | Positive | 7487850 - 7487926 | Not Available |
| merr family transcriptional regulator | APR52_34695 | Not Available | Negative | 7487953 - 7488414 | 18087.8 |
| integration host factor subunit alpha | APR52_34700 | Q12BQ7 | Negative | 7488488 - 7488859 | 13514.1 |
| phenylalanine--trna ligase subunit beta | APR52_34705 | Q8XZ24 | Negative | 7488865 - 7491306 | 88323.2 |
| phenylalanine--trna ligase subunit alpha | APR52_34710 | C5CUU6 | Negative | 7491370 - 7492446 | 40105.4 |
| 50s ribosomal protein l20 | APR52_34715 | C5CUU5 | Negative | 7492563 - 7492922 | 13420.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
