Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(r)-hydroxyalkanoic acid synthase | APR52_34620 | P23608 | Negative | 7475961 - 7477730 | 64851.2 |
| hypothetical protein | APR52_34625 | Not Available | Positive | 7477912 - 7478235 | 11482.2 |
| laccase | APR52_34630 | P33663 | Negative | 7478167 - 7478934 | 26519.4 |
| maleylacetoacetate isomerase | APR52_34635 | O86043 | Negative | 7478934 - 7479572 | 24024.7 |
| hypothetical protein | APR52_34640 | Not Available | Negative | 7479605 - 7480522 | 32912.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | APR52_34645 | O86042 | Positive | 7480693 - 7481394 | 24672.4 |
| adp-ribose pyrophosphatase | APR52_34650 | P93740 | Positive | 7481416 - 7481967 | 20881.9 |
| hypothetical protein | APR52_34655 | P0AE93 | Positive | 7481972 - 7482463 | 17492.3 |
| peptidase m23 | APR52_34660 | P45682 | Positive | 7482613 - 7483122 | 17893.7 |
| phospholipase | APR52_34665 | Not Available | Negative | 7483130 - 7484746 | 59329.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
