Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_34565 | Not Available | Negative | 7462951 - 7463682 | 26479.1 |
| porin | APR52_34570 | Not Available | Positive | 7464049 - 7465323 | 44252.9 |
| hypothetical protein | APR52_34575 | A7X6S1 | Positive | 7465886 - 7466395 | 18310.5 |
| coa-transferase | APR52_34585 | Q9HAC7 | Negative | 7468803 - 7469984 | 42455.8 |
| acyl-coa dehydrogenase | APR52_34590 | Not Available | Negative | 7470013 - 7470900 | 32356.5 |
| laci family transcriptional regulator | APR52_34595 | Not Available | Negative | 7470920 - 7471921 | 34223.4 |
| lysr family transcriptional regulator | APR52_34600 | Not Available | Positive | 7472069 - 7472986 | 33310.3 |
| s-transferase | APR52_34605 | Q46845 | Negative | 7473174 - 7474052 | 32601.5 |
| glutathione s-transferase | APR52_34610 | O80852 | Positive | 7474081 - 7474713 | 23208.9 |
| acetyl-coa acetyltransferase | APR52_34615 | P14611 | Negative | 7474738 - 7475916 | 40155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
