Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | APR52_02760 | Not Available | Positive | 606826 - 607818 | 36366.3 |
| hypothetical protein | APR52_02765 | Not Available | Positive | 607936 - 608115 | 6948.1 |
| cation transporter | APR52_02770 | Not Available | Positive | 608145 - 609068 | 32616.6 |
| hypothetical protein | APR52_02775 | Not Available | Positive | 609298 - 609663 | 12704.2 |
| cyclopropane-fatty-acyl-phospholipid synthase | APR52_02780 | Not Available | Positive | 610273 - 611508 | 45909.6 |
| hypothetical protein | APR52_02785 | Not Available | Negative | 611519 - 611920 | 14502.0 |
| hypothetical protein | APR52_02790 | Not Available | Negative | 612027 - 612842 | 28563.9 |
| hypothetical protein | APR52_02795 | Q17938 | Negative | 612835 - 613830 | 37705.9 |
| hypothetical protein | APR52_02805 | Q9XWZ2 | Positive | 614623 - 616278 | 59969.7 |
| l-glyceraldehyde 3-phosphate reductase | APR52_02810 | Q46851 | Positive | 616389 - 617429 | 38065.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
