Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_34335 | Not Available | Positive | 7412115 - 7412363 | 8438.17 |
| transposase | APR52_34345 | P03835 | Negative | 7412816 - 7414123 | 49519.1 |
| tetr family transcriptional regulator | APR52_34355 | Not Available | Negative | 7415646 - 7416302 | 24006.8 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_34360 | Q8G3D4 | Positive | 7416518 - 7417681 | 41445.9 |
| ketoacid-coa transferase | APR52_34365 | Q0S7P9 | Positive | 7417683 - 7418522 | 29552.8 |
| branched-chain amino acid abc transporter permease | APR52_34375 | Not Available | Positive | 7419372 - 7420244 | 30139.8 |
| branched-chain amino acid abc transporter permease | APR52_34380 | Not Available | Positive | 7420255 - 7421286 | 35740.0 |
| abc transporter atp-binding protein | APR52_34385 | Q0B7X0 | Positive | 7421283 - 7422062 | 27606.9 |
| abc transporter atp-binding protein | APR52_34390 | Not Available | Positive | 7422079 - 7422783 | 24895.5 |
| atp-dependent acyl-coa ligase | APR52_34395 | B5F750 | Positive | 7422843 - 7424468 | 60047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
