Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase | APR52_34185 | Not Available | Positive | 7378478 - 7380646 | 77766.8 |
| indolepyruvate oxidoreductase | APR52_34190 | Not Available | Positive | 7380660 - 7382303 | 58295.3 |
| abc transporter substrate-binding protein | APR52_34195 | Not Available | Positive | 7382342 - 7383334 | 34314.3 |
| c4-dicarboxylate abc transporter | APR52_34200 | Not Available | Positive | 7383425 - 7384462 | 37476.8 |
| c4-dicarboxylate abc transporter permease | APR52_34205 | Not Available | Positive | 7384492 - 7384992 | 18845.3 |
| c4-dicarboxylate abc transporter permease | APR52_34210 | Not Available | Positive | 7384989 - 7386290 | 45729.2 |
| 4-hydroxybenzoyl-coa thioesterase | APR52_34215 | P56653 | Positive | 7386314 - 7386730 | 15757.8 |
| alkaline phosphatase | APR52_34220 | Not Available | Positive | 7386842 - 7388692 | 67144.8 |
| protein tyrosine phosphatase | APR52_34225 | Q55535 | Negative | 7388847 - 7389317 | 16996.4 |
| hypothetical protein | APR52_34230 | Not Available | Positive | 7389457 - 7389738 | 10635.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
