Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_34135 | B1G889 | Negative | 7367660 - 7368958 | 44355.4 |
| ribulose 1,5-bisphosphate carboxylase | APR52_34140 | Q7WNK2 | Negative | 7368955 - 7370244 | 45242.0 |
| glyoxalase | APR52_34145 | Not Available | Negative | 7370244 - 7370783 | 20296.9 |
| abc transporter permease | APR52_34150 | Not Available | Negative | 7370815 - 7372716 | 66583.8 |
| abc transporter substrate-binding protein | APR52_34155 | Not Available | Negative | 7372726 - 7373763 | 37323.9 |
| laci family transcriptional regulator | APR52_34160 | Not Available | Positive | 7373876 - 7374949 | 38463.3 |
| hypothetical protein | APR52_34165 | Not Available | Positive | 7374988 - 7375425 | 15881.0 |
| lysr family transcriptional regulator | APR52_34170 | Not Available | Negative | 7375432 - 7376361 | 34448.2 |
| sorbosone dehydrogenase | APR52_34175 | O51055 | Positive | 7376653 - 7377693 | 38332.5 |
| hypothetical protein | APR52_34180 | P00106 | Positive | 7377740 - 7378372 | 22238.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
