Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_34085 | Not Available | Negative | 7354678 - 7355850 | 41264.0 |
| abc transporter permease | APR52_34090 | D4GPW1 | Negative | 7355901 - 7356821 | 32146.2 |
| sugar abc transporter permease | APR52_34095 | D4GPW2 | Negative | 7357147 - 7358292 | 40171.2 |
| abc transporter | APR52_34100 | A2RKA7 | Negative | 7358285 - 7359826 | 54826.4 |
| guanine permease | APR52_34105 | Q57772 | Negative | 7359975 - 7361276 | 45520.2 |
| lysr family transcriptional regulator | APR52_34110 | Not Available | Negative | 7361418 - 7362395 | 36198.0 |
| aldehyde oxidase | APR52_34115 | Q6AUV1 | Negative | 7362589 - 7365039 | 87665.8 |
| fad-binding molybdopterin dehydrogenase | APR52_34120 | P10351 | Negative | 7365044 - 7366687 | 58919.4 |
| hypothetical protein | APR52_34125 | Not Available | Negative | 7366872 - 7367309 | 15409.8 |
| hypothetical protein | APR52_34130 | Not Available | Negative | 7367320 - 7367556 | 8569.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
