Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_02710 | Not Available | Negative | 599515 - 600009 | 17851.1 |
| hypothetical protein | APR52_02715 | Not Available | Positive | 600123 - 600716 | 21445.6 |
| hypothetical protein | APR52_02720 | Not Available | Negative | 600719 - 600928 | 7665.59 |
| acyl-coa dehydrogenase | APR52_02725 | Not Available | Positive | 601122 - 602135 | 35547.2 |
| acetylglucosaminylphosphatidylinositol deacetylase | APR52_02730 | Not Available | Positive | 602123 - 602905 | 28308.8 |
| methyltransferase | APR52_02735 | Not Available | Positive | 602902 - 603516 | 22453.8 |
| glycosyl transferase | APR52_02740 | Not Available | Positive | 603513 - 604217 | 23938.7 |
| plasmid stabilization protein | APR52_02745 | Not Available | Positive | 604353 - 604661 | 10794.5 |
| nmra family transcriptional regulator | APR52_02750 | Not Available | Positive | 604697 - 605560 | 30896.1 |
| aldo/keto reductase | APR52_02755 | Not Available | Negative | 605580 - 606632 | 38365.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
