Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_33935 | Not Available | Positive | 7324537 - 7325424 | 31271.1 |
| abc transporter permease | APR52_33940 | Q5PH87 | Positive | 7325424 - 7326434 | 34070.2 |
| abc transporter | APR52_33945 | Q0SIB7 | Positive | 7326431 - 7327213 | 27971.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | APR52_33950 | P0A9H6 | Positive | 7327377 - 7327946 | 20957.4 |
| 5,6-dimethylbenzimidazole synthase | APR52_33955 | Q92PC8 | Positive | 7327952 - 7328644 | 25478.7 |
| biopolymer transporter exbd | APR52_33960 | Not Available | Positive | 7328644 - 7329117 | 17260.7 |
| hypothetical protein | APR52_33965 | Not Available | Positive | 7329114 - 7329467 | 12744.4 |
| cobalt chelatase | APR52_33970 | P29929 | Positive | 7329470 - 7333498 | 145115.0 |
| cobalamin biosynthesis protein cobd | APR52_33975 | A9GM39 | Positive | 7333516 - 7334490 | 34869.0 |
| aminotransferase | APR52_33980 | Not Available | Positive | 7334487 - 7335515 | 36252.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
