Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-coa decarboxylase | APR52_33835 | P12617 | Positive | 7302136 - 7303608 | 54525.3 |
| abc transporter substrate-binding protein | APR52_33840 | Not Available | Positive | 7303684 - 7304673 | 34428.5 |
| enoyl-coa hydratase | APR52_33845 | P64019 | Positive | 7304670 - 7305473 | 28007.8 |
| malonyl-coa synthase | APR52_33850 | Q8H151 | Positive | 7305512 - 7307047 | 55346.6 |
| serine hydrolase | APR52_33855 | Not Available | Negative | 7307054 - 7308493 | 53412.9 |
| phenylacetaldoxime dehydratase | APR52_33860 | Q76EV4 | Negative | 7308550 - 7309605 | 39910.1 |
| amidohydrolase | APR52_33865 | Q500U1 | Negative | 7309628 - 7310632 | 35703.6 |
| arac family transcriptional regulator | APR52_33870 | Not Available | Positive | 7310812 - 7311774 | 35366.1 |
| hypothetical protein | APR52_33875 | C5CN82 | Negative | 7311800 - 7312627 | 29594.5 |
| hypothetical protein | APR52_33880 | P0A9F8 | Positive | 7312798 - 7313661 | 31596.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
