Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c' | APR52_33785 | P95339 | Negative | 7292904 - 7293209 | 10443.9 |
| hypothetical protein | APR52_33790 | Not Available | Positive | 7293336 - 7293590 | 9663.83 |
| hypothetical protein | APR52_33795 | Not Available | Positive | 7293682 - 7295373 | 61551.1 |
| dihydroxy-acid dehydratase | APR52_33800 | A1WMU5 | Negative | 7295384 - 7297078 | 59133.5 |
| lysr family transcriptional regulator | APR52_33805 | Not Available | Positive | 7297189 - 7298145 | 34362.9 |
| lysr family transcriptional regulator | APR52_33810 | Not Available | Negative | 7298093 - 7299064 | 34941.1 |
| short-chain dehydrogenase | APR52_33815 | A0A5B8YU81 | Positive | 7299205 - 7299978 | 27163.2 |
| hypothetical protein | APR52_33820 | Not Available | Positive | 7299998 - 7300267 | 9224.57 |
| prolipoprotein diacylglyceryl transferase | APR52_33825 | Q12BS8 | Positive | 7300332 - 7301186 | 32146.8 |
| gntr family transcriptional regulator | APR52_33830 | Not Available | Positive | 7301391 - 7302062 | 25429.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
