Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-chelation protein chad | APR52_33680 | Not Available | Positive | 7273019 - 7274611 | 57882.8 |
| hypothetical protein | APR52_33685 | Not Available | Negative | 7274648 - 7275493 | 31210.8 |
| peptidylprolyl isomerase | APR52_33690 | O83369 | Negative | 7275516 - 7275992 | 17445.9 |
| lysr family transcriptional regulator | APR52_33695 | Not Available | Negative | 7276030 - 7276956 | 33008.6 |
| fmn reductase | APR52_33700 | Q9USJ6 | Positive | 7277098 - 7277682 | 21500.9 |
| pirin | APR52_33705 | Q9HZ00 | Positive | 7277679 - 7278542 | 30476.1 |
| amidohydrolase | APR52_33710 | Not Available | Positive | 7278613 - 7279815 | 43008.2 |
| receptor | APR52_33715 | Not Available | Positive | 7279869 - 7280831 | 32932.5 |
| toxin hipa | APR52_33725 | P23874 | Positive | 7281397 - 7282710 | 48739.2 |
| hypothetical protein | APR52_33730 | Not Available | Positive | 7282848 - 7283537 | 22531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
