Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine decarboxylase proenzyme | APR52_33630 | B4U6K3 | Negative | 7263850 - 7264236 | 13496.2 |
| transketolase | APR52_33635 | P27302 | Positive | 7264409 - 7266511 | 75194.5 |
| glyceraldehyde-3-phosphate dehydrogenase | APR52_33640 | P52694 | Positive | 7266573 - 7267574 | 36195.5 |
| hypothetical protein | APR52_33645 | Not Available | Negative | 7267641 - 7268084 | 15901.7 |
| hypothetical protein | APR52_33650 | Not Available | Negative | 7268267 - 7268866 | 21563.2 |
| antibiotic biosynthesis monooxygenase | APR52_33655 | Not Available | Negative | 7268988 - 7269296 | 10780.2 |
| divalent metal cation transporter mnth | APR52_33660 | Q8XSF6 | Positive | 7269427 - 7270755 | 47045.7 |
| hypothetical protein | APR52_33665 | Not Available | Positive | 7270864 - 7271154 | 10673.1 |
| pirin | APR52_33670 | P58112 | Negative | 7271159 - 7272229 | 38472.5 |
| extradiol dioxygenase | APR52_33675 | Not Available | Negative | 7272379 - 7272795 | 15182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
