Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin | APR52_33580 | Q8ZDJ2 | Positive | 7247258 - 7253281 | 218639.0 |
| penicillin-binding protein 1c | APR52_33585 | P76577 | Positive | 7253301 - 7255634 | 84259.4 |
| glycerophosphodiester phosphodiesterase | APR52_33590 | Not Available | Positive | 7255708 - 7257063 | 48487.6 |
| iron transporter | APR52_33595 | Not Available | Positive | 7257226 - 7257531 | 9990.55 |
| hypothetical protein | APR52_33600 | Not Available | Positive | 7257528 - 7259201 | 60082.1 |
| hypothetical protein | APR52_33605 | Not Available | Positive | 7259201 - 7259566 | 12419.3 |
| aldo/keto reductase | APR52_33610 | Q00049 | Negative | 7259574 - 7260641 | 38839.5 |
| lysr family transcriptional regulator | APR52_33615 | Not Available | Positive | 7260772 - 7261737 | 35072.1 |
| xaa-pro aminopeptidase | APR52_33620 | P15034 | Negative | 7261679 - 7263076 | 51620.2 |
| nucleotidyltransferase | APR52_33625 | Q9JXY0 | Negative | 7263107 - 7263820 | 24806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
