Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone sura | APR52_33530 | Q121Q4 | Positive | 7234596 - 7236005 | 50984.4 |
| 16s rrna methyltransferase | APR52_33535 | C5CS95 | Positive | 7236016 - 7236783 | 28396.6 |
| barnase inhibitor | APR52_33540 | Not Available | Negative | 7237102 - 7237521 | 15801.8 |
| guanine-specific ribonuclease n1 and t1 | APR52_33545 | P30289 | Negative | 7237581 - 7237997 | 14980.6 |
| malate dehydrogenase | APR52_33550 | Q9ZFV8 | Negative | 7238200 - 7240548 | 84994.1 |
| hypothetical protein | APR52_33555 | Not Available | Positive | 7240728 - 7241777 | 37902.7 |
| hypothetical protein | APR52_33560 | Not Available | Positive | 7241881 - 7243368 | 52986.1 |
| hypothetical protein | APR52_33565 | Not Available | Positive | 7243426 - 7243644 | 7785.92 |
| spermidine synthase | APR52_33570 | Q8XQC8 | Positive | 7243659 - 7245206 | 56448.2 |
| fumarate reductase | APR52_33575 | Not Available | Positive | 7245392 - 7247023 | 58651.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
