Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR52_02660 | Not Available | Negative | 586557 - 586925 | 12771.1 |
| histidine kinase | APR52_02665 | Not Available | Negative | 587027 - 588250 | 45269.5 |
| chemotaxis protein cheb | APR52_02670 | P62642 | Negative | 588240 - 588845 | 21220.8 |
| chemotaxis protein cher | APR52_02675 | Q88GG4 | Negative | 588842 - 589657 | 30775.8 |
| two-component system sensor histidine kinase/response regulator | APR52_02680 | Q54YZ9 | Negative | 589753 - 593256 | 129167.0 |
| atp-dependent dna helicase | APR52_02685 | Q9HM14 | Positive | 593507 - 595852 | 85687.7 |
| 2og-fe(ii) oxygenase | APR52_02690 | Not Available | Positive | 595839 - 596495 | 24547.3 |
| mate family efflux transporter | APR52_02695 | O34474 | Positive | 596542 - 597894 | 47185.2 |
| arac family transcriptional regulator | APR52_02700 | P0ACI1 | Positive | 597963 - 598832 | 31714.0 |
| sam-dependent methyltransferase | APR52_02705 | Q7ZVJ8 | Positive | 598870 - 599484 | 22118.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
