Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | APR52_33480 | Not Available | Positive | 7222969 - 7224207 | 44080.2 |
| protoheme ix farnesyltransferase | APR52_33485 | Q21XT4 | Positive | 7224204 - 7225109 | 33080.3 |
| photosynthetic protein synthase i | APR52_33490 | Not Available | Positive | 7225114 - 7225731 | 22002.4 |
| dna alkylation repair protein | APR52_33495 | O07541 | Positive | 7225736 - 7226599 | 31508.8 |
| rna polymerase factor sigma-32 | APR52_33500 | P44404 | Negative | 7226660 - 7227601 | 34472.2 |
| hypothetical protein | APR52_33505 | Not Available | Negative | 7227773 - 7228243 | 17465.9 |
| luxr family transcriptional regulator | APR52_33510 | Not Available | Positive | 7228420 - 7229145 | 25345.5 |
| histidine kinase | APR52_33515 | P44578 | Positive | 7229156 - 7230946 | 65085.1 |
| hypothetical protein | APR52_33520 | P57010 | Negative | 7230959 - 7231956 | 35041.4 |
| lps biosynthesis protein | APR52_33525 | Q223E4 | Positive | 7231962 - 7234574 | 96907.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
