Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpir family transcriptional regulator | APR52_33380 | Not Available | Negative | 7206128 - 7207015 | 31645.8 |
| abc transporter substrate-binding protein | APR52_33385 | Not Available | Positive | 7207150 - 7208145 | 34451.8 |
| succinylglutamate desuccinylase | APR52_33390 | Not Available | Positive | 7208142 - 7209092 | 34334.1 |
| potassium transporter | APR52_33395 | Q8FLA1 | Negative | 7209089 - 7210939 | 67347.1 |
| nad(p)h dehydrogenase | APR52_33400 | A8ALQ5 | Negative | 7210940 - 7211656 | 26321.0 |
| cobyrinic acid a,c-diamide synthase | APR52_33405 | Not Available | Positive | 7211736 - 7212356 | 22748.4 |
| dehydratase | APR52_33410 | Q7U2S5 | Positive | 7212442 - 7212912 | 17492.2 |
| hypothetical protein | APR52_33415 | Not Available | Negative | 7212934 - 7213227 | 10083.1 |
| rrna methylase | APR52_33420 | Q12E50 | Negative | 7213359 - 7213820 | 17339.8 |
| phosphoribosyltransferase | APR52_33425 | Not Available | Negative | 7213841 - 7214557 | 25542.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
