Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-demethylubiquinone-9 3-methyltransferase | APR52_33330 | Not Available | Negative | 7197748 - 7198167 | 14912.0 |
| polyketide cyclase | APR52_33335 | Not Available | Negative | 7198217 - 7198753 | 19405.3 |
| 3-demethylubiquinone-9 3-methyltransferase | APR52_33340 | P16681 | Negative | 7198799 - 7199224 | 15011.1 |
| tetr family transcriptional regulator | APR52_33345 | Not Available | Positive | 7199385 - 7200050 | 23524.1 |
| marr family transcriptional regulator | APR52_33350 | Not Available | Negative | 7200068 - 7200568 | 18003.0 |
| twin-arginine translocation pathway signal protein | APR52_33355 | Not Available | Negative | 7200642 - 7201637 | 34127.8 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | APR52_33360 | P9WGQ6 | Negative | 7201667 - 7202431 | 26026.7 |
| feruloyl-coa synthase | APR52_33365 | E5XP76 | Negative | 7202463 - 7204322 | 66875.0 |
| enoyl-coa hydratase | APR52_33370 | Q5LLW6 | Negative | 7204372 - 7205145 | 27372.9 |
| amidohydrolase | APR52_33375 | Not Available | Positive | 7205249 - 7206127 | 33133.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
