Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_33280 | Not Available | Negative | 7188600 - 7189061 | 15775.3 |
| guanylate cyclase | APR52_33285 | P40137 | Negative | 7189230 - 7190873 | 59777.8 |
| cyclic nucleotide-binding protein | APR52_33290 | Not Available | Positive | 7190927 - 7191673 | 26622.9 |
| gntr family transcriptional regulator | APR52_33295 | Not Available | Negative | 7191686 - 7192150 | 15743.7 |
| lysr family transcriptional regulator | APR52_33300 | Not Available | Negative | 7192303 - 7193235 | 34979.8 |
| hydroxyquinol 1,2-dioxygenase | APR52_33305 | Q471I0 | Positive | 7193398 - 7194273 | 31757.4 |
| hypothetical protein | APR52_33310 | Not Available | Positive | 7194303 - 7194908 | 22903.8 |
| permease | APR52_33315 | Not Available | Positive | 7195009 - 7195770 | 27258.5 |
| rna signal recognition particle 4.5s rna | APR52_33320 | P0AAQ8 | Negative | 7195787 - 7196146 | 13493.6 |
| disulfide bond formation protein dsba | APR52_33325 | P42670 | Negative | 7196211 - 7197686 | 50470.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
