Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_33230 | Not Available | Positive | 7179124 - 7179801 | 25129.3 |
| nucleotidyltransferase | APR52_33235 | P94389 | Positive | 7179829 - 7180707 | 32924.4 |
| rna 3'-phosphate cyclase | APR52_33240 | Q8Y2V6 | Positive | 7180818 - 7181861 | 36555.3 |
| marr family transcriptional regulator | APR52_33245 | Not Available | Negative | 7181871 - 7182320 | 16412.0 |
| hypothetical protein | APR52_33250 | Not Available | Positive | 7182394 - 7183380 | 34315.5 |
| amidohydrolase | APR52_33255 | Q60FX6 | Positive | 7183388 - 7184359 | 36923.9 |
| salicylate hydroxylase | APR52_33260 | Not Available | Positive | 7184361 - 7185581 | 44420.1 |
| 4-hydroxybenzoate transporter | APR52_33265 | Not Available | Positive | 7185623 - 7186987 | 47327.2 |
| hypothetical protein | APR52_33270 | Not Available | Positive | 7186984 - 7187394 | 14172.8 |
| maleylacetate reductase | APR52_33275 | Q45072 | Positive | 7187493 - 7188554 | 36869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
