Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | APR52_33170 | Q21RW0 | Negative | 7167126 - 7167461 | 12096.9 |
| 50s ribosomal protein l4 | APR52_33175 | C5CP52 | Negative | 7167458 - 7168078 | 23069.8 |
| 50s ribosomal protein l3 | APR52_33180 | C5CP53 | Negative | 7168078 - 7168758 | 23647.3 |
| hypothetical protein | APR52_33185 | Not Available | Negative | 7169005 - 7169538 | 18212.7 |
| hypothetical protein | APR52_33190 | Not Available | Negative | 7169553 - 7171127 | 53607.4 |
| 30s ribosomal protein s10 | APR52_33195 | A1VIP9 | Negative | 7171294 - 7171608 | 11816.6 |
| exonuclease | APR52_33205 | Not Available | Negative | 7172595 - 7173158 | 20848.8 |
| transcriptional regulator | APR52_33210 | P38035 | Negative | 7173175 - 7174785 | 59619.3 |
| hypothetical protein | APR52_33215 | Not Available | Positive | 7175482 - 7176633 | 42516.8 |
| rna ligase | APR52_33220 | P46850 | Positive | 7176923 - 7178149 | 44703.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
