Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | APR52_33120 | Not Available | Positive | 7161816 - 7162502 | 24283.9 |
| gcn5 family acetyltransferase | APR52_33125 | O94340 | Positive | 7162499 - 7163086 | 21033.1 |
| peroxiredoxin | APR52_33130 | Q69TY4 | Negative | 7163109 - 7163615 | 17617.0 |
| 30s ribosomal protein s17 | APR52_33135 | C5CP44 | Negative | 7163713 - 7163982 | 10162.5 |
| 50s ribosomal protein l29 | APR52_33140 | A1TJ15 | Negative | 7163992 - 7164201 | 7678.33 |
| 50s ribosomal protein l16 | APR52_33145 | C5CP46 | Negative | 7164257 - 7164673 | 15417.8 |
| 30s ribosomal protein s3 | APR52_33150 | A1TJ13 | Negative | 7164741 - 7165652 | 33121.8 |
| 50s ribosomal protein l22 | APR52_33155 | C5CP48 | Negative | 7165668 - 7166000 | 12072.8 |
| 30s ribosomal protein s19 | APR52_33160 | C5CP49 | Negative | 7166010 - 7166288 | 10400.9 |
| 50s ribosomal protein l2 | APR52_33165 | C5CP50 | Negative | 7166299 - 7167123 | 30158.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
