Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_33070 | Not Available | Negative | 7155236 - 7155634 | 13665.0 |
| hypothetical protein | APR52_33075 | Not Available | Negative | 7155628 - 7156080 | 15861.5 |
| hypothetical protein | APR52_33080 | Not Available | Negative | 7156186 - 7156650 | 16815.0 |
| hypothetical protein | APR52_33085 | Not Available | Negative | 7156828 - 7157196 | 12448.5 |
| phosphoenolpyruvate-protein phosphotransferase | APR52_33090 | P23536 | Negative | 7157322 - 7159118 | 65619.3 |
| phosphocarrier protein hpr | APR52_33095 | P23537 | Negative | 7159115 - 7159384 | 9580.72 |
| pts fructose transporter subunit iia | APR52_33100 | Not Available | Negative | 7159353 - 7159808 | 16291.9 |
| hypothetical protein | APR52_33105 | Not Available | Negative | 7159960 - 7160523 | 19362.2 |
| redoxin | APR52_33110 | Q63DQ8 | Positive | 7160627 - 7161124 | 17734.5 |
| cytochrome c | APR52_33115 | P00138 | Negative | 7161201 - 7161647 | 15479.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
