Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate transporter | APR52_33020 | P75788 | Positive | 7144299 - 7145453 | 40894.1 |
| hypothetical protein | APR52_33025 | Not Available | Positive | 7145569 - 7145892 | 11467.7 |
| hypothetical protein | APR52_33030 | Not Available | Positive | 7146052 - 7146408 | 12563.0 |
| hypothetical protein | APR52_33035 | P21648 | Negative | 7146453 - 7147496 | 36452.4 |
| usher protein | APR52_33040 | Not Available | Negative | 7147493 - 7150216 | 97425.2 |
| molecular chaperone groes | APR52_33045 | P43661 | Negative | 7150234 - 7151004 | 27592.4 |
| fimbrial protein | APR52_33050 | P43660 | Negative | 7151203 - 7151742 | 18021.5 |
| nadp-dependent oxidoreductase | APR52_33055 | Not Available | Negative | 7151942 - 7152991 | 37325.4 |
| histidine kinase | APR52_33060 | Not Available | Negative | 7153099 - 7154505 | 52916.0 |
| two-component system response regulator | APR52_33065 | O78428 | Negative | 7154502 - 7155197 | 25619.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
