Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | APR52_32770 | Not Available | Negative | 7093443 - 7094600 | 40802.0 |
| abc transporter | APR52_32775 | P94440 | Negative | 7094607 - 7095515 | 32190.2 |
| peptidase | APR52_32780 | Not Available | Negative | 7095515 - 7096528 | 36808.2 |
| hypothetical protein | APR52_32785 | Not Available | Negative | 7096525 - 7096920 | 14460.2 |
| 3-oxoacyl-acp synthase | APR52_32790 | A4SVV4 | Negative | 7096953 - 7098095 | 41783.2 |
| dialkylrecorsinol condensing enzyme | APR52_32795 | Not Available | Negative | 7098085 - 7099080 | 36429.8 |
| abc transporter substrate-binding protein | APR52_32800 | Not Available | Negative | 7099334 - 7101064 | 64092.0 |
| hypothetical protein | APR52_32805 | Not Available | Negative | 7101166 - 7101474 | 11556.6 |
| sugar abc transporter permease | APR52_32810 | Q9Z3R7 | Negative | 7101488 - 7102300 | 30641.9 |
| abc transporter permease | APR52_32815 | Not Available | Negative | 7102297 - 7103187 | 33001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
