Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_32550 | Not Available | Negative | 7054643 - 7054831 | 7196.96 |
| hypothetical protein | APR52_32555 | Not Available | Negative | 7054918 - 7055226 | 11397.0 |
| hypothetical protein | APR52_32560 | Not Available | Negative | 7055258 - 7055899 | 23577.4 |
| hypothetical protein | APR52_32565 | Not Available | Negative | 7055883 - 7056176 | 10635.0 |
| hypothetical protein | APR52_32570 | Not Available | Negative | 7056173 - 7056844 | 24500.6 |
| transglutaminase | APR52_32740 | Q9HZX3 | Positive | 7087558 - 7089588 | 73800.6 |
| n-methyl-d-aspartate receptor nmdar2c subunit | APR52_32750 | Not Available | Positive | 7090932 - 7091573 | 24189.6 |
| hypothetical protein | APR52_32755 | Not Available | Negative | 7091590 - 7092081 | 17501.2 |
| beta-ketoacyl synthase | APR52_32760 | Q02578 | Negative | 7092078 - 7093166 | 36690.9 |
| acyl carrier protein | APR52_32765 | Not Available | Negative | 7093174 - 7093446 | 9864.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
