Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| evpb family type vi secretion protein | APR52_32440 | Not Available | Negative | 7038421 - 7039923 | 56087.1 |
| hypothetical protein | APR52_32445 | Not Available | Negative | 7039952 - 7040488 | 19423.4 |
| isocitrate dehydrogenase | APR52_32455 | Q02NB5 | Negative | 7043629 - 7044888 | 45871.3 |
| cell envelope biogenesis protein tola | APR52_32460 | Not Available | Positive | 7045110 - 7045433 | 10963.8 |
| hypothetical protein | APR52_32465 | Not Available | Positive | 7045601 - 7045792 | 6366.91 |
| hypothetical protein | APR52_32470 | Not Available | Positive | 7045897 - 7046367 | 17338.2 |
| hypothetical protein | APR52_32480 | Not Available | Negative | 7047217 - 7047744 | 19731.0 |
| hypothetical protein | APR52_32485 | Not Available | Negative | 7047741 - 7048187 | 16589.9 |
| hypothetical protein | APR52_32490 | Not Available | Positive | 7048250 - 7048543 | 10813.9 |
| hypothetical protein | APR52_32495 | Not Available | Negative | 7049192 - 7050055 | 30681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
