Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adaptor clps | APR52_32385 | C5CLL8 | Negative | 7025372 - 7025731 | 13257.0 |
| hypothetical protein | APR52_32390 | Not Available | Negative | 7026216 - 7027226 | 36182.9 |
| type vi secretion protein | APR52_32395 | Not Available | Negative | 7027223 - 7028311 | 40090.0 |
| hypothetical protein | APR52_32400 | Not Available | Negative | 7028308 - 7028985 | 24055.1 |
| hypothetical protein | APR52_32405 | Not Available | Negative | 7028982 - 7029773 | 28898.2 |
| type vi secretion protein vask | APR52_32410 | Not Available | Negative | 7029778 - 7033800 | 145748.0 |
| hypothetical protein | APR52_32420 | Not Available | Negative | 7035204 - 7035794 | 21179.1 |
| type vi secretion protein | APR52_32425 | Not Available | Negative | 7035913 - 7037268 | 49579.6 |
| hypothetical protein | APR52_32430 | Not Available | Negative | 7037298 - 7037804 | 18810.0 |
| hcp1 family type vi secretion system effector | APR52_32435 | Not Available | Negative | 7037855 - 7038340 | 17707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
