Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_32335 | Not Available | Positive | 7014350 - 7015273 | 32571.9 |
| hypothetical protein | APR52_32340 | Not Available | Positive | 7015273 - 7015728 | 16306.2 |
| cytosine deaminase | APR52_32345 | P25524 | Positive | 7015788 - 7017071 | 46010.7 |
| esterase | APR52_32350 | Not Available | Positive | 7017101 - 7017973 | 30543.8 |
| nad-dependent deacetylase | APR52_32355 | Q4UZX0 | Negative | 7017970 - 7018824 | 30377.3 |
| gnat family acetyltransferase | APR52_32360 | Not Available | Negative | 7018929 - 7019408 | 17425.8 |
| hypothetical protein | APR52_32365 | Not Available | Negative | 7019476 - 7019904 | 15032.2 |
| exonuclease i | APR52_32370 | P04995 | Negative | 7019936 - 7021378 | 54171.1 |
| cardiolipin synthase | APR52_32375 | C5D794 | Negative | 7021425 - 7022870 | 53202.4 |
| atp-dependent clp protease atp-binding subunit clpa | APR52_32380 | P0ABI1 | Negative | 7022982 - 7025303 | 84765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
