Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_02555 | Not Available | Negative | 542933 - 543286 | 12236.6 |
| hypothetical protein | APR52_02560 | Not Available | Positive | 543505 - 544230 | 25382.5 |
| rna polymerase subunit sigma | APR52_02565 | Not Available | Positive | 544241 - 544801 | 21102.3 |
| hypothetical protein | APR52_02570 | Not Available | Positive | 544848 - 545810 | 34243.6 |
| hypothetical protein | APR52_02575 | Not Available | Positive | 545947 - 559533 | 467834.0 |
| hypothetical protein | APR52_02580 | Not Available | Positive | 559844 - 561469 | 58034.9 |
| biopolymer transporter exbd | APR52_02590 | Q9RMT1 | Positive | 563428 - 563838 | 14767.2 |
| hypothetical protein | APR52_02595 | Not Available | Positive | 563927 - 564595 | 23824.4 |
| hypothetical protein | APR52_02600 | Not Available | Positive | 564643 - 566430 | 64318.6 |
| hypothetical protein | APR52_02605 | Not Available | Positive | 566417 - 567211 | 27559.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
