Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase type 11 | APR52_32230 | Not Available | Negative | 6991179 - 6991943 | 27869.7 |
| polysaccharide deacetylase | APR52_32235 | Q8DP63 | Negative | 6991940 - 6992761 | 29388.6 |
| transporter | APR52_32240 | Not Available | Negative | 6992778 - 6995195 | 84878.8 |
| hypothetical protein | APR52_32245 | Not Available | Negative | 6995192 - 6995842 | 23438.4 |
| acyl-coa synthetase | APR52_32250 | Not Available | Negative | 6995799 - 6996836 | 38569.8 |
| coa ligase | APR52_32255 | Not Available | Negative | 6996833 - 6998551 | 60643.3 |
| hypothetical protein | APR52_32260 | Not Available | Negative | 6998598 - 6999248 | 23544.9 |
| acyl carrier protein | APR52_32265 | Not Available | Negative | 6999254 - 6999559 | 10939.8 |
| atp-binding protein | APR52_32270 | P39342 | Positive | 6999662 - 7001176 | 53784.4 |
| crp/fnr family transcriptional regulator | APR52_32275 | Not Available | Positive | 7001196 - 7001903 | 26574.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
