Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-opening dioxygenase liga | APR52_32180 | Q12AD4 | Negative | 6979441 - 6981534 | 76216.0 |
| cell division protein ftsz | APR52_32185 | Not Available | Negative | 6981615 - 6982712 | 38925.0 |
| chromosome segregation protein smc | APR52_32190 | A9BZW2 | Negative | 6982726 - 6986241 | 129851.0 |
| hypothetical protein | APR52_32195 | Not Available | Positive | 6986390 - 6987148 | 27703.9 |
| addiction module antidote protein | APR52_32200 | Not Available | Positive | 6987240 - 6987596 | 12160.7 |
| phosphatidylinositol kinase | APR52_32205 | P55412 | Positive | 6987593 - 6988888 | 46711.7 |
| hypothetical protein | APR52_32210 | Not Available | Positive | 6989009 - 6989239 | 7221.53 |
| mobilization protein | APR52_32215 | Not Available | Positive | 6989289 - 6989981 | 25202.6 |
| 3-ketoacyl-acp reductase | APR52_32220 | Not Available | Negative | 6989978 - 6990709 | 25106.6 |
| hydroxymyristoyl-acp dehydratase | APR52_32225 | Not Available | Negative | 6990706 - 6991182 | 17143.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
