Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter atp-binding protein | APR52_32125 | Not Available | Negative | 6968508 - 6969392 | 32117.3 |
| cyanuric acid amidohydrolase | APR52_32130 | P58329 | Negative | 6969401 - 6970555 | 39718.1 |
| allantoinase | APR52_32135 | Q1J391 | Negative | 6970552 - 6972021 | 53087.7 |
| short-chain dehydrogenase | APR52_32140 | Not Available | Negative | 6972039 - 6972830 | 27502.3 |
| abc transporter substrate-binding protein | APR52_32145 | Not Available | Negative | 6972869 - 6973909 | 37474.2 |
| isochorismatase | APR52_32150 | A8IAC9 | Negative | 6973911 - 6974756 | 30816.9 |
| lysr family transcriptional regulator | APR52_32155 | Q85G62 | Positive | 6974912 - 6975817 | 33851.0 |
| lysr family transcriptional regulator | APR52_32160 | P52696 | Negative | 6975819 - 6976718 | 32684.8 |
| monooxygenase | APR52_32165 | Q9HWG9 | Positive | 6976791 - 6978041 | 45792.8 |
| twin-arginine translocation pathway signal | APR52_32170 | Not Available | Positive | 6978076 - 6979038 | 33316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
