Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase | APR52_32075 | C5CY41 | Positive | 6958481 - 6958780 | 10842.0 |
| glutamyl-trna amidotransferase | APR52_32080 | Q21RH9 | Positive | 6958777 - 6960291 | 53027.9 |
| glutamyl-trna amidotransferase | APR52_32085 | C5CY39 | Positive | 6960293 - 6961783 | 54033.2 |
| hypothetical protein | APR52_32090 | Not Available | Negative | 6961864 - 6962574 | 26327.1 |
| orotate phosphoribosyltransferase | APR52_32095 | A1VIL5 | Negative | 6962587 - 6963270 | 24121.8 |
| exodeoxyribonuclease iii | APR52_32100 | P27695 | Positive | 6963282 - 6964085 | 30220.0 |
| hydrolase | APR52_32105 | A4FW32 | Negative | 6964714 - 6965874 | 41459.9 |
| hypothetical protein | APR52_32110 | Not Available | Negative | 6966225 - 6967268 | 37096.1 |
| cyclophilin-like superfamily protein | APR52_32115 | Not Available | Negative | 6967295 - 6967702 | 14962.9 |
| abc transporter permease | APR52_32120 | Not Available | Negative | 6967729 - 6968511 | 27583.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
